Enter a list of SNPs in the box below, then press enter for coexpression analysis. The SNPs should share some common feature, such as putative association with a given phenotype at a permissive p-value threshold (eg. 5e-6), such that it might reasonably be expected that some of the SNPs in the entry set will share an expression profile across the FANTOM5 expression atlas.
Please cite: Baillie JK et al. Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease. https://doi.org/10.1101/095349.
chr start end [optional_snp_id] [optional_p_value]
tab or space-delimited; coordinates must be hg19.
p-value is used for generating network visualisation only.
|Height||8882 snps searched||471 promoters hit||166 distinct regions mapped||29 significantly-coexpressed regions|
|Total Cholesterol||6421 snps searched||519 promoters hit||128 distinct regions mapped||29 significantly-coexpressed regions|
|Low-density lipoprotein||4644 snps searched||321 promoters hit||92 distinct regions mapped||19 significantly-coexpressed regions|
|High-density lipoprotein||5410 snps searched||450 promoters hit||101 distinct regions mapped||17 significantly-coexpressed regions|
|Triglycerides||4863 snps searched||437 promoters hit||97 distinct regions mapped||23 significantly-coexpressed regions|
|Ulcerative colitis||2162 snps searched||234 promoters hit||83 distinct regions mapped||20 significantly-coexpressed regions|
|Crohn's disease||1924 snps searched||217 promoters hit||70 distinct regions mapped||23 significantly-coexpressed regions|
|Systolic Blood Pressure||417 snps searched||25 promoters hit||13 distinct regions mapped|
|Diastolic Blood Pressure||711 snps searched||26 promoters hit||14 distinct regions mapped|